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A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.
Pages
About me
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Posts
Future Blog Post
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Blog Post number 4
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Blog Post number 3
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Blog Post number 2
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Blog Post number 1
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portfolio
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publications
HIV–TB co-infection treatment: Modeling and optimal control theory perspectives
HIV-TB co-infection treatment: modeling and optimal control theory perspectives. Mallela, A., Lenhart, S., Vaidya, N.K. (2016), Journal of Computational and Applied Mathematics, 307:143-161
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Crosstalk and ultrasensitivity in protein degradation pathways
Crosstalk and ultrasensitivity in protein degradation pathways. Mallela, A., Nariya, M.K., and Deeds, E.J. (2020), PLOS Computational Biology, 16(12):e1008492
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Daily forecasting of regional epidemics of Coronavirus Disease with Bayesian uncertainty quantification, United States
Daily forecasting of regional epidemics of Coronavirus disease with Bayesian uncertainty quantification. Lin, Y.T., Neumann, J., Miller, E.F., Posner, R.G., Mallela, A., Safta, C., Ray, J., Thakur, G., Chinthavali, S., and Hlavacek, W.S. (2021), Emerging Infectious Diseases, 27(3):767
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The role of stochasticity in noise-induced tipping point cascades: a master equation approach
The role of stochasticity in noise-induced tipping cascades: A master equation approach. Mallela, A. and Hastings, A. (2021), Bulletin of Mathematical Biology, 83(5):1-20
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Robustness and the evolution of length control strategies in the T3SS and flagellar hook
Robustness and the evolution of length control strategies in the T3SS and flagellar hook. Nariya, M.K., Mallela, A., Shi, J.J., and Deeds, E.J. (2021), Biophysical Journal, 120(17):3820-3830
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Tipping cascades in a multi-patch system with noise and spatial coupling
Tipping cascades in a multi-patch system with noise and spatial coupling. Mallela, A. and Hastings, A. (2021), Bulletin of Mathematical Biology, 83(11):1-27
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Bayesian inference of state-level COVID-19 basic reproduction numbers across the United States
Bayesian inference of state-level COVID-19 basic reproduction numbers across the United States. Mallela, A., Neumann, J., Miller, E.F., Chen, Y., Posner, R.G., Lin, Y.T., and Hlavacek, W.S. (2022), Viruses, 14(1):157
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Implementation of a practical Markov chain Monte Carlo sampling algorithm in PyBioNetFit
Implementation of a practical Markov chain Monte Carlo sampling algorithm in PyBioNetFit. Neumann, J., Lin, Y.T., Mallela, A., Miller, E.F., Colvin, J., Duprat, A.T., Chen, Y., Hlavacek, W.S., and Posner, R.G. (2022), Bioinformatics, 38(6):1770-1772
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The United States COVID-19 forecast hub dataset
The United States COVID-19 Forecast Hub dataset. Cramer, E.Y., Huang, Y., Wang, Y., et al. (2022), Scientific Data, 9(462):1-15
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Optimal management of stochastic invasion in a metapopulation with Allee effects
Optimal management of stochastic invasion in a metapopulation with Allee effects. Mallela, A. and Hastings, A. (2022), Journal of Theoretical Biology, 549:111221
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Quantification of early nonpharmaceutical interventions aimed at slowing transmission of Coronavirus Disease 2019 in the Navajo Nation and surrounding states (Arizona, Colorado, New Mexico, and Utah)
Quantification of early nonpharmaceutical interventions aimed at slowing transmission of Coronavirus Disease 2019 in the Navajo Nation and surrounding states. Miller, E.F., Neumann, J. Chen, Y., Mallela, A., Lin, Y.T., Hlavacek, W.S., and Posner, R.G. (2023), PLOS Global Public Health, 3(6):e0001490
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Differential contagiousness of respiratory disease across the United States
Differential contagiousness of respiratory disease across the United States. Mallela, A., Lin, Y.T., and Hlavacek, W.S. (2023), Epidemics, 45:100718
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Impacts of Vaccination and Severe Acute Respiratory Syndrome Coronavirus 2 Variants Alpha and Delta on Coronavirus Disease 2019 Transmission Dynamics in Four Metropolitan Areas of the United States
Impacts of vaccination and Severe Acute Respiratory Syndrome Coronavirus 2 variants Alpha and Delta on Coronavirus Disease 2019 transmission dynamics in four metropolitan areas of the United States. Mallela, A., Chen, Y., Lin, Y.T., Miller, E.F., Neumann, J., He, Z., Nelson, K.E., Posner, R.G., and Hlavacek, W.S. (2024), Bulletin of Mathematical Biology, 86(3):31
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Evaluation of FluSight influenza forecasting in the 2021–22 and 2022–23 seasons with a new target laboratory-confirmed influenza hospitalizations
Evaluation of FluSight influenza forecasting in the 2021-22 and 2022-23 seasons with a new target laboratory-confirmed influenza hospitalizations. Mathis, S.M., Webber, A.E., Basu, A., et al. (2024), Nature Communications, 15:6289
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talks
Talk 1 on Relevant Topic in Your Field
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Conference Proceeding talk 3 on Relevant Topic in Your Field
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